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TÜBİTAK Projects

1001 Research Projects

Assist.Prof. Deniz Yucel

Histology Embryology

Development of Layered, Tubular, Small-Medium Vascular Tissue by Tissue Engineering Methods

Vasif Hasirci, Halime Kenar

Assist.Prof. Nihan Unubol

Vocational School of Health Services

Development of antimicrobial catheters using peptide antibiotics and innovative surface binding strategies specific to biofilm forming bacteria

Ozgul Gok, Tugba Ozal Ildeniz, Yesim Gurol, Tanil Kocago;z, Sesin Kocagoz, Tarik Eren

Prof. Meltem Muftuoglu

Medical Biotechnology

Investigation of Effects of Mitochondria-targeted Drug-Loaded Nanocarrier Systems on Mismatch DNA Repair Mechanism Damaged Colon Cancer

Yasemin Uzuner (Researcher), Ozgul Gok (Researcher), Devrim Ozarslan (Advisor), Meryem Sedef Erdal (Advisor)

Assist.Prof. Meltem Kolgazi

Physiology

The Healing Effect of Akkermansia Muciniphila on Inflammation and Enteric Nervous System Degeneration Due to Chronic Colitis

Serap Arbak (Researcher), Sinem Oktem Okullu (Researcher), Merve Acıkel Elmas (Researcher)

Assist.Prof. Sinem Oktem Okullu

Medical Microbiology

Determination of Protein Profiles in Stomach Organoid Model Infected with H. Pylori Strains with Open and Closed Outer Membrane Inflammatory Protein A (Oipa) and Comparison of Protein Profiles Obtained by Maldi Imaging Method in Stomach Tissues Infected with Oipa Open and Closed Strains

Aysel Ozpinar (Advisor), Arzu Tiftikci (Advisor), Umit Ince (Researcher), Aytac Erman (Researcher) Yasemin Ucal (Researcher)

Assoc.Prof. Halime Kenar

Medical Engineering

Development of an In vitro Functional Human Heart Muscle-Coronary Vascular Model by Three-Dimensional Bioprinting

Deniz Yucel(Advisor), Sadan Yavuz (Advisor), Ayse Karson (Researcher),

Assist.Prof. Emel Baloglu

Pharmacology

Detection of Proteins Interacting with the Na+/K+-ATPase Pump in an Ischemic Heart Disease Model

Zeynep Aslihan Durer (Advisor), Emre Deniz (Advisor), Evren Kilinc (Researcher), Emel Timucin (Researcher)

Prof. Osman Ugur Sezerman

Biostatistics and Medical Informatics

Development of Diagnostic Methods and Creation of Appropriate Gene Panels for Primary Ciliary Dyskinesia (PSD) Patients in Turkey

Ozlem Tugce Kaya (Researcher), Serap Sirvanci (Advisor), Sercin Karahuseyinoglu (Advisor), Cansin Sackesen (Researcher), Hasan Bayram (Researcher), Pinar Ata (Researcher), Ela Erdem Eralp (Researcher), Zeynep Seda Uyan (Researcher)

Assoc.Prof. Emel Timucin

Biostatistics and Medical Informatics

Semi-Rational Peptide Design and Experimental Validations Targeting the AurorA A/N-Myc Complex

Emel Baloglu (Researcher), Ozgur Kutuk (Researcher), Ozgur Gul (Researcher), Ahmet Can Timucin (Researcher), Koray Ozduman (Advisor)

Assist.Prof. Yasemin Ucal

Medical Biochemistry

Biomarker Research in Hormone Receptor Positive Breast Cancer Tissues Evaluated in Different Risk Groups Based on Pam50 Test Result (220S105)

Fatma Tokat (Researcher), Halil Kara (Researcher), Taner Korkmaz (Researcher), Aysel Ozpinar (Advisor), Umit Ince (Advisor), Cihan Uras (Advisor)

Dr. Guralp Onur Ceyhan

General Surgery

Production of anti-CX3CR1 monoclonal antibody for use in the preclinical treatment of pancreatic cancer and chronic pancreatitis

Guldal Suyen (Researcher), Tanil Kocagoz (Researcher), Elif Sever (Researcher), Ibrahim Hatipoglu (Researcher), Ihsan Ekin Demir (Advisor)

Prof. Dr. Vasif Hasirci

Medical Engineering

Creating a Nervous Tissue Model on a Micropatterned Surface, Investigation of Axon Orientation and Nerve Damage Healing Processes

Nesrin Hasirci (Researcher), Deniz Yucel (Researcher)

Prof. Ali Osmay Gure

Medical Biology

Prognosis and Drug Susceptibility Biomarker Detection in Gastric Cancer Subgroups

Secil Demirkol Canlı(Researcher)

Assoc.Prof. Ahmet Bulut

Computer Engineering

Autonomous Management of Search Engine Advertising Campaigns

Prof. Dr. Filiz Onat

Medical Pharmacology

Investigation of the Role of the Nigro-Striatal Dopaminergic Pathway in Epileptogenesis

Rezzan Gulhan (Researcher), Umit Suleyman Sehirli (Researcher), Serap Sirvancı (Researcher), Medine Gulcebi (Researcher), Ozlem Akman (Researcher)

1002 Quick Support Program

Assist.Prof. Yasemin Ucal

Medical Biochemistry

Investigation of Metabolite Profiles of Noninvasive Follicular Thyroid Neoplasm (NIFTP) with Papillary-Like Nuclear Characteristics by MALDI Imaging Mass Spectrometry Method

Prof. Aysel Ozpinar (Researcher), Assist. Prof. Fatma Tokat (Researcher)

Assoc.Prof. Ahmet Tarik Baykal

Medical Biochemistry

Biomarker Detection to Develop an Early Diagnostic Kit in Cervical Cancer

Muhittin Abdulkadir Serdar (Researcher), Mete Gungor (Advisor), Ozguc Takmaz (Advisor)

Assist.Prof. Merve Acikel Elmas

Histoloji ve Embriyoloji ABD

The Healing Effect of Aposine on Testicular Damage Caused by Monosodium Glutamate

Prof. Mustafa Serteser

Medical Biochemistry

Development of Automated Micropipette Affinity Chromatography Analysis Method Alternative to Immunofixation Electrophoresis Analysis in Clinical Tests

Betul Sahin (Researcher), Mete Bora Tuzuner (Researcher)

1003 Priority Fields R&D Projects Support Program

Assoc.Prof. Ozge Can

Medical Engineering

Development of Antimicrobial Peptide and Similar Inspired by Nature

Tanıl Kocagoz, Guldal Suyen, Serap Arbak, Tugba Arzu Ozal Ildeniz, Tarik Eren (Yildiz Teknik University), Deniz Baycin Hizal (Turgut Ilaclari A.S.), Ahmet Emin Atik , Recep Serdar Alpan, Yigit Erdemgil, Zeynep Zulfiye Yildirim Keles

Assoc.Prof. Emel Timucin

Biostatistics and Medical Informatics

Machine Learning-Based New Gene Discovery and Development of a Drug Repositioning Platform for Improving Immunotherapy Efficacy in Cancer

İlknur Melis Durasi (Researcher), Gunseli Bayram Akcapınar(Researcher), Gokcen Eren (Advisor)

1505 University-Industry Cooperation Support Projects

Prof. Ali Osmay Gure

Medical Biology

Using Microrna-Based Biomarkers In Prediction Of The Window Of Endometrial Implant Using Minimally Invasive Methods

Les Mikrogen Genetik Tani Merkezi Ltd.Sti.

1512 Techno-enterprise Capital Support Program

Eda Tanoglu

Project Office/ BİGG

Acibadem University Bigghealth Program

 

2515 COST European Cooperation Program in Science and Technology

Assoc.Prof. Ahmet Tarik Baykal

Medical Biochemistry

Peripheral Mitochondrial Dysfunction in Alzheimer's Disease

Ebba Lohmann(Advisor), Hasmet Ayhan Hanagasi (Researcher), Zeynep Gamze Guven (Researcher), Gulsen Yildiz (Researcher)

3501 National Young Researcher Career Development Projects

Assoc.Prof. Zeynep Aslihan Durer

Biophysics (Medicine) Biochemistry (Pharmacy)

Determination of functional differences of vinculin isoforms in muscle cells

Devrim Oz Arslan, Beki Kan (Advisor), Zehra Sayers (Sabanci University, Advisor)

Assist.Prof. Ozgul Gok

Medical Engineering

Development and In Vitro Evaluation of Vcam-1 Targeted Drug Delivery System for Reducing Oxidative Stress for the Treatment of Atherosclerosis

Prof. Dr. Sahin Senay (Researcher), Yasemin Uzuner (Advisor)

Assist.Prof. Zeynep Kanlidere

Basic Pharmaceutical Sciences

Preparation of Biocatalyst from Chemically Modified Oligonucleotides and Its Use in Enantioselective Carbohydrate Synthesis

Sevgi Sarigul (Researcher)

Assist.Prof. Elif Nedret Keskinoz

Basic Medical Sciences, Anatomy

Effects of Uridine Monophosphate (UMP), Choline, and Fish Oil Supplementation on Synaptogenesis in an Experimental Alzheimer's Disease Model

Merve Acikel Elmas (Researcher), Serap Arbak (Advisor), Emel Ulupinar (Advisor), İsmail Hakki Ulus (Advisor)

Assist.Prof. Nazli Keskin

Molecular Biology and Genetics

Comparison of the Effects of Hotspot Mutant P53 Proteins in Glioblastoma

Mehmet Batu Erman (Advisor), Emre Deniz (Advisor)

1001 Research Projects

Project Coordinator Department Project Name Project Team
Prof. Ahmet Ozbilgin (Celal Bayar University) Medical Microbiology Determination of the Molecular Mechanism of Gene Expression Regulation Responsible for the Development of Antimony Resistance in Leishmania Tropica Ozgur Kurt ve Isın Akyar , Yusuf Ozbel (Ege University), Hatice Ertabaklar (Adnan Menderes University), Fadile Yildiz Zeyrek (Harran University), Mehmet Harman (Dicle University), Gulnaz Culha (Mustafa Kemal University), Ipek Ostan Ural (Celal Bayar University), Yavuz Yesilova (Harran University), Tanil Kocagoz (Advisor), Seray Ozensoy (Advisor, Ege University), Cumhur Gunduz (Advisor, Ege University)
Assoc. Prof. Ahmet Tarik Baykal Medical Biochemistry Investigation of the Onset of Neurodegenerative Mechanisms in a 5XFAD Transgenic Mouse Model of Alzheimer's Disease by Proteomics Methods Mete Bora Tuzuner (Acibadem Labmed)
Prof. Ozgur Kurt Medical Microbiology Detailed genomic and proteomic characterization of the hybrid Leishmania donovani / L. infantum, which was first described in a domestic visceral leishmaniasis case in Turkey, and a comparative analysis of the pathogen effects and immune response in vivo in a mouse model with reference strains of L. Donovani and L. Infantum. Sinem Oktem Okullu, Umit Ince, Fadile Yildiz Zeyrek, O.Ugur Sezerman, Ozge Can, Z.Tanil Kocagoz
Assist. Prof. Deniz Yucel Histology Embryology Development of Layered, Tubular, Small-Medium Diameter Vascular Tissue by Tissue Engineering Methods Vasif Hasirci, Halime Kenar
Prof. Hasan Faruk Buyru School of Medicine Minimally Interventional Activation of Ovarian Follicles with Femtosecond Laser System in Premature Ovarian Failure Ercan Bastu (Researcher), Bahar Yuksel Ozgor (Advisor), Onur Ferhanoglu (Advisor), Seydi Yavas (Advisor), Mehmet Burcin Umlu (Advisor)
Assist. Prof. Nihan Unubol Vocational School of Health Services Development of antimicrobial catheters using peptide antibiotics and innovative surface binding strategies specific to biofilm forming bacteria Ozgul Gok, Tugba Ozal Ildeniz, Yesim Gurol, Tanil Kocagoz, Sesin Kocagoz, Tarik Eren
Assist. Prof. Sinem Oktem Okullu Medical Microbiology ABD Determination of Protein Profiles in Stomach Organoid Model Infected with H. Pylori Strains with Open and Closed Outer Membrane Inflammatory Protein A (Oipa) and Comparison of Protein Profiles Obtained by Maldi Imaging Method in Stomach Tissues Infected with Oipa Open and Closed Strains | Prof. Aysel Ozpinar, Prof. Arzu Tiftikci, Prof. Umit Ince, Assoc. Prof. Aytac Erman, Assist. Prof. Yasemin Ucal

1002 Quick Support Program

Project Coordinator Department Project Name Project Team
Instructor Ozgul Ozturk Physical Therapy and Rehabilitation DThe Effects of "Motion Observation" Method on Pain, Functional Level and Brain Hemodynamics in Patients with Trace Osteoarthritis Assist. Prof. Sinem Burcu Erdogan (Researcher)
Assoc. Prof. Ozge Can Medical Engineering Developing a Method for Determining Antigen Binding Properties of Therapeutic Monoclonal Antibody in IgG Structure by Making Validations with the Surface Plasmon Resonance System  
Research Assistant Ecem Cengiz Orku Nutrition and Dietetics Determination of the Effects of Aspartame, Acesulfame K Saccharin and Sucralose Compounds on Glucose Tolerance Prof. Murat Bas, Prof. Guldal Suyen

1003 Priority Fields R&D Projects Support Program

Project Coordinator Department Project Name Project Team
M. Zeki Durak (Yildiz Technical University) Medical Microbiology Rapid and Sensitive Detection of Methicillin-Resistant Staphylococcus aureus (MRSA) and Vancomycin-Resistant Enterococci (VRE) Infections with the Surface Plasmon Resonance-Based Kit System Isin Akyar Aysel Karatas (Acibadem Labmed Clinical Laboratories), Burcu Ekim (Gazi University), Onur Karatuna (Advisor), Aykutlu Dana (Advisor, Bilkent University)
Prof. Meltem Muftuoglu Molecular Biology and Genetics Development of novel 2-indolinone compounds as anti-interleukin 1 and chemotherapeutic drugs-Subproject 2: Development of DNA repair inhibitors as a new drug for the treatment of hereditary nonpolyposis colon cancer (MLH1 gene defect) Cengiz Yakicier, Burak Erman (Koc University), Nilgun Karali (Istanbul University), Batu Erman (Sabanci University), Gokçe Cihan Ustundag (Istanbul University)
Prof. Ayşe Nurdan Tozun School of Medicine Flexible Robotic System for Endoscopy Diler Kitapcioglu, Pelin Celikbilek Erkasap, Mehmet Emin Aksoy
Assist. Prof. Emre Deniz Molecular Biology and Genetics Genome-Level Screening and Modeling of Resistance Mechanisms Developed Against Cytotoxic Drugs in Cancer Treatments Using CRISPR/Cas9 Technology Zeynep Tokcaer Keskin (Researcher), Meltem Muftuoglu (Advisor), Cengiz Yakicier (Advisor), Batu Erman (Advisor/Sabanci University)
Prof. Alp Dincer School of Medicine Development of a Diagnostic Product That Can Show the Genetic, Metabolic and Histopathological Characteristics of Glial Brain Tumors Non-invasively by Magnetic Resonance Imaging Koray Ozduman, Alpay Ozcan, Ozge Can (Advisor), Esin Ozturk Isık (Bogazici University)
Assoc. Prof. Ozge Can Medical Engineering Development of Antimicrobial Peptide and Similar Inspired by Nature Tanil Kocagoz, Guldal Suyen, Serap Arbak, Tugba Arzu Ozal Ildeniz, Tarik Eren (Yildiz Technical University), Deniz Baycin Hizal (Turgut Ilaclari A.S.), Ahmet Emin Atik , Recep Serdar Alpan, Yigit Erdemgil, Zeynep Zulfiye Yildirim Keles
Prof. Aysel Ozpınar Medical Biochemistry Developing a Clinical Screening System by Investigating the Role of Pericytes in Multiple Sclerosis Disease in Disease Subtypes Assoc. Prof. Murat Kurtuncu, Assoc. Prof. Ahmet Tarik Baykal

1505 University-Industry Cooperation Support Projects

Project Coordinator Department Project Name Project Team
Prof. Dr. Tanil Kocagoz Medical Microbiology Development of Cell Lines Producing Biosimilar TNF-Alpha Blocker Meltem Muftuoglu, Ozge Can, Doruk Engin (Ankara Biotechnology Institute)

1512 Techno-enterprise Capital Support Program

Project Coordinator Department Project Name Project Team
Aslı Semerci Molecular Biology and Genetics Developing a method for early diagnosis of Alzheimer's Disease by protein quantification analysis (Project no. 2150405) Prof. Meltem Muftuoglu (Advisor)

1601 Call Program

Project Coordinator Department Project Name Project Team
Seyma Merve Erdogan Research Projects Office Acibadem University BİGG Project Duygu Tekin, Cengiz Kurtoglu

2209-A University Students Research Projects Support Program

Project Coordinator Department Project Name Project Team
Tugçe Bozkurt Molecular Biology and Genetics Investigation of Molecule that Selectively Kills Hereditary Nonpolyposis Colon Cancer Cell Caused by MSH2 Gene Mutation Prof. Meltem Muftuoglu (Advisor)
Çagla Akduman School of Medicine Epigenetic regulation of DNA repair genes in sporadic Alzheimer's disease Prof. Meltem Muftuoglu (Advisor)

2515 COST European Cooperation Program in Science and Technology

Project Coordinator Department Project Name Project Team
Assoc. Prof. Ahmet Tarik Baykal Medical Biochemistry Peripheral Mitochondrial Dysfunction in Alzheimer's Disease Ebba Lohmann (Advisor), Hasmet Ayhan Hanagasi (Researcher), Zeynep Gamze Guven (Researcher), Gulsen Yildiz (Researcher)
Dr. Nafiye Cigdem Aktekin Foreign Languages Relationship of Intergenerational Solidarity with Family and School Components Assist. Prof. Utkun Aydin (Advisor) , Dr. Hatice Celebi (Researcher)

3001 Initial R&D Projects

Project Coordinator Department Project Name Project Team
Assist. Prof. Deniz Agirbasli Medical Biology Investigation of the relationship between vitamin D and leukocyte telomere length in postmenopausal women Assoc. Prof. Meral Bayramoglu (Researcher / Expert), Prof. Meltem Muftuoglu (Advisor), Prof. Mustafa Cengiz Yakıcier (Advisor)
Prof. Ukke Karabacak Nursing Measurement Tool Development and Simulation for Intramuscular Drug Administration to the Ventrogluteal Area Alper Karacan, Coskun Cengiz , Ozlem Dogu (Sakarya University), Ela Yilmaz Coskun (Namik Kemal University)
Assoc. Prof. Alpay Ozcan Vocational School, Biomedical Device Technologies Microstructure Simulations Obtained from Diffusion Magnetic Resonance Imaging and Modeling of Scanner Effects on Signal  
Assoc. Prof. Zeynep Aslihan Durer Biophysics Investigation of Specific Interaction Partners of the Atg3 Protein Devrim Oz Arslan, Beki Kan, Emel Timucin (Advisor)

3501 National Young Researcher Career Development Projects

Project Coordinator Department Project Name Project Team
Assist. Prof. Deniz Agirbasli Medical Biology Association of High-Density Lipoprotein-Cholesterol (HDL-K) Levels with Expression of Autophagy-Related Genes Evren Kilinc, Devrim Oz Arslan (Advisor)
Assist. Prof. Sinem Oktem Okullu Medical Microbiology Identification of Possible Interaction Proteins Involved in the Binding of Outer Inflammatory Protein A (Oipa, Outer Inflammatory Protein A) to the Gastric Epithelial Surface, Known to be Effective in the Pathogenesis of Helicobacter Pylori and Has Vaccine Target Potential Tanil Kocagoz, Ozge Can, Deniz Baycin (Turgut Ilac, Advisor)
Assoc. Prof. Zeynep Aslihan Durer Biophysics (Medicine) Biochemistry (Pharmacy) Determination of functional differences of vinculin isoforms in muscle cells Devrim Oz Arslan, Beki Kan (Advisor), Zehra Sayers (Sabanci University, Advisor)

Proje Yürütücüsü Anabilim Dalı/Bölümü Projenin Adı Proje Ekibi
Prof. Dr. Ali Osmay Güre Tıbbi Biyoloji Diyabet Hastalarında Görülen Algı, Öğrenme ve Hafıza Kayıplarıyla Ilgili Post-Transkripsyonel (Gen Ifadesi, RNA Değişimleri ve Düzenleyici Kodlamayan RNAlar) Moleküler Ağların Tespiti  
Doç. Dr. Fabienne Dumoulin Tıp Mühendisliği PDT, PTT ya da Işıkla Tetiklenen İlaç Salınımı İçin Tasarlanmış ve Kendiliğinden Düzenlenerek Ortogonal Fonksiyonlanabilen Karışık ya da Saf Ftalozomları Oluşturabilen Amfifilik Ftalosiyaninler Ayşe Gül Gürek(Araştırmacı), Ümit İnci(Araştırmacı)
Prof. Dr. Alp Dinçer Radyoloji Kan Beyin Bariyer Bozulumu Için Atardamar Fırıl Etiketleme (Bbb-Asl) Tekniğinin Beyin Tümörlerinde Değerlendirilmesi (Jpnd "Debbie" Projesi- İş Paketi 5) Esin Işık Öztürk(Araştırmacı), Ayça Erşen Danyeli(Araştırmacı), Koray Özduman(Araştırmacı)